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Previous gene FasterDB identifier: 2202 - TMEM184B (C22orf5, DKFZP586A1024, FM08, HS5O6A) transmembrane protein 184B Next gene
Gene Close
Symbol TMEM184B
Synonyms C22orf5, DKFZP586A1024, FM08, HS5O6A
Description transmembrane protein 184B
EnsEMBL link ENSG00000198792
Chromosome 22 - reverse strand
Chromosomal location
(UCSC link)		 38615298 - 38669040 (53743bp)
Sequence sequence
Associated transcripts NM_001195072 NM_012264 AK292652 AB097053 AK309071 BC015489 CR749859 NM_001195071 BX648345 CR456413 AL096879 AK075417 AK309607 BC012983
Alternative 3' splice site (acceptor) Close
 Identifier   Position   Distance (bp)   Transcript 
ASS1 10 65 NM_001195072
NM_012264
AK292652
AB097053
BC015489
CR749859
NM_001195071
BX648345
CR456413
AL096879
AK075417
Alternative 5' splice sites (donor) Close
 Identifier   Position   Distance (bp)   Transcript 
ASS1 12 -25 AK309071
Intron retentions Close
 Identifier   Position   Transcript 
Exon deletions Close
 Identifier   Position   Transcript 
No data
Transcription start sites Close
 Identifier   Position   Gene coordinates   Chromosomal coordinates   Transcript 
P1 1 1 38669040 NM_001195072
NM_012264
AK292652
P2 1 30 38669011 AK309071
P3 2 371 38668670 NM_001195071
BX648345
P4 6 29247 38639794 AK309607
Protein prediction Close
 Transcript name   Sequence 
NM_001195072 sequence
NM_012264 sequence
AK292652 sequence
AB097053 sequence
AK309071 sequence
BC015489 sequence
CR749859 sequence
NM_001195071 sequence
BX648345 sequence
CR456413 sequence
AL096879 sequence
AK075417 sequence
AK309607 sequence
BC012983 sequence
Polyadenylation Close
 Identifier   Position   Gene coordinates of cleavage site   Chromosomal coordinates of cleavage site   Pattern   PolyA tail   Accession number   Type 
PA1 9 33665 38635376 no AK309607 Full_length
PA2 13 47607 38621434 no AK309071 Full_length
PA3 15 51684 38617357 no AK292652 Full_length
PA4 15 53559 38615482 CATAAA yes BM127731 3prime_est
PA5 15 53743 38615298 AATATA yes NM_001195072 Cdna
PA6 15 53743 38615298 AATATA yes NM_012264 Cdna
PA7 15 53743 38615298 AATATA yes NM_001195071 Cdna
PA8 15 53743 38615298 AATATA no AL096879 Cdna
PA9 15 53743 38615298 AATATA no AK075417 Cdna

More polyadenylation sites ...

Exon skipping Close
 Identifier   Position   Transcript 
ES1 2 NM_001195072
NM_012264
AK292652
AB097053
AK309071
BC015489
CR749859
ES2 4 NM_012264
AK292652
AB097053
AK309071
BC015489
NM_001195071
BX648345
CR456413
AL096879
ES3 6 NM_001195072
NM_012264
AK292652
AB097053
AK309071
BC015489
CR749859
NM_001195071
BX648345
CR456413
AL096879
AK075417
ES4 7 NM_001195072
NM_012264
AK292652
AB097053
AK309071
BC015489
CR749859
NM_001195071
BX648345
CR456413
AL096879
AK075417
ES5 8 NM_001195072
NM_012264
AK292652
AB097053
AK309071
BC015489
CR749859
NM_001195071
BX648345
CR456413
AL096879
AK075417
ES6 9 NM_001195072
NM_012264
AK292652
AB097053
AK309071
BC015489
CR749859
NM_001195071
BX648345
CR456413
AL096879
AK075417
Splice site strength Close
 Identifier   Site   Exon   Strength   Alternative   Sequence 
S1 5' (donor) 1 7.59 no GAGgtatcc
S2 5' (donor) 2 8.49 no CGAgtgagt
S3 3' (acceptor) 2 -20.76 no cgccccgcgaggtcgcccgtGGG
S4 5' (donor) 3 8.63 no CAGgtaccc
S5 3' (acceptor) 3 9.34 no ttgcaatttcttctctctagGCT
S6 5' (donor) 4 -1.62 no TTTgtgtgt
S7 3' (acceptor) 4 10.16 no tttgttcttttcctccccagCCC
S8 5' (donor) 5 7.13 no AGGgtgagg
S9 3' (acceptor) 5 8.98 no ccccacacctctgcccccagATC
S10 5' (donor) 6 -19.86 no GAAgcctct
S11 3' (acceptor) 6 -23.37 no cctacttcctcccttttggaTGA
S12 5' (donor) 7 -2.47 no CAGgcgtga
S13 3' (acceptor) 7 -5.5 no caggcaatccgcccgccttgGCC
S14 5' (donor) 8 -36.59 no TTCttttag
S15 3' (acceptor) 8 0.95 no ccaaagtgctggtattacagGCA
S16 5' (donor) 9 -22.46 no TTTcagtgg
S17 3' (acceptor) 9 8.96 no ctctcgcccttcgtattcagGCT
S18 5' (donor) 10 6.51 no TGAgtgagt
S19 3' (acceptor) 10 6.11 no tcacctccattgctgtttagAAT
S20 3' (acceptor) 10 7.3 yes cctggacactctcttcgcagCCT
S21 5' (donor) 11 6.99 no CAGgtgtgt
S22 3' (acceptor) 11 10.46 no gctatgcttgtctcttccagGTC
S23 5' (donor) 12 5.78 no TGAgtaagc
S24 3' (acceptor) 12 12.21 no cctccttttccccccaacagGCC
S25 5' (donor) 12 4.02 yes TCGgcaagt
S26 5' (donor) 13 9.6 no AAGgtgagc
S27 3' (acceptor) 13 7.53 no aaatgctccccgtcccgcagCGT
S28 5' (donor) 14 9.11 no AAGgtatga
S29 3' (acceptor) 14 9.26 no acccgtgcctccccatccagGCA
S30 3' (acceptor) 15 8.73 no tcccgctccctgcccggcagGCC
Conserved exons Close
 Gene identifier mouse   Position human  Position mouse 
16406 3 3
16406 5 4
16406 10 5
16406 11 6
16406 12 7
16406 13 8
16406 14 9
16406 15 11
Report Close
 Exon   Number of supporting transcripts 
 Transcription initiation & first exon(s) 
1 2
2 1
6 1
 Transcription termination & last exon(s) 
9 1
13 1
15 7
 Exon skipping 
2 7
4 9
6 12
7 12
8 12
9 12
 Alternative 3' splice sites 
10 1
 Alternative 5' splice sites 
12 1
Splicing factors Close
 Splicing factor   Exon array   CLIP data   Exon position 
CELF1 (CUG-BP)
 
DAZAP1
 
ELAVL1 (HuR) Yes Yes
 
ESRP1/2 (ESRP) Yes
 
FUS Yes
 
HNRNPA1 Yes
 
HNRNPA2B1 Yes
 
HNRNPAB
 
HNRNPC Yes
 
HNRNPF/HNRNPH1 Yes Yes
 
HNRNPL Yes
 
HNRNPL_2
 
HNRNPM Yes
 
HNRNPU Yes
 
MBNL
 
NOVA1
 
PTBP1/2 (PTB) Yes Yes
 
QKI
 
RBFOX2 (FOX2) Yes
 
RBM4 Yes
 
SFRS3 (SRP20)
 
SFRS6 (SRP55)
 
SFRS7 (9G8)
 
SRSF1 (SF2ASF)
 
SRSF2 (SC35)
 
SRSF5 (SRP40)
 
TDP43
 
TIA1/TIAL1 Yes
 
TRA2A
 
TRA2B
 
YBX1 (YB1)
 
Expression Close
 Exon position   Tissues   Cell lines   Cancer cell lines 
1 Expression Expression Expression
2 Expression Expression Expression
3 Expression Expression Expression
4 Expression Expression Expression
5 Expression Expression Expression
6 Expression Expression Expression
7 Expression Expression Expression
8 Expression Expression Expression
9 Expression Expression Expression
10 Expression Expression Expression
11 Expression Expression Expression
12 Expression Expression Expression
13 Expression Expression Expression
14 Expression Expression Expression
15 Expression Expression Expression
Exon-Intron Close
 Position   Type   Gene coordinates   Chromosomal coordinates   Length   Sequence   Features 
1 Exon 1 - 151 38668890-38669040 151 sequence download
1 Intron 152 - 370 38668671-38668889 219 sequence -
2 Exon 371 - 536 38668505-38668670 166 sequence download
2 Intron 537 - 25015 38644026-38668504 24479 sequence -
3 Exon 25016 - 25265 38643776-38644025 250 sequence download
3 Intron 25266 - 26149 38642892-38643775 884 sequence -
4 Exon 26150 - 26250 38642791-38642891 101 sequence download
4 Intron 26251 - 26934 38642107-38642790 684 sequence -
5 Exon 26935 - 27100 38641941-38642106 166 sequence download
5 Intron 27101 - 29246 38639795-38641940 2146 sequence -
6 Exon 29247 - 29776 38639265-38639794 530 sequence download
6 Intron 29777 - 30802 38638239-38639264 1026 sequence -
7 Exon 30803 - 30827 38638214-38638238 25 sequence download
7 Intron 30828 - 31410 38637631-38638213 583 sequence -
8 Exon 31411 - 31683 38637358-38637630 273 sequence download
8 Intron 31684 - 33308 38635733-38637357 1625 sequence -
9 Exon 33309 - 33665 38635376-38635732 357 sequence download
9 Intron 33666 - 41635 38627406-38635375 7970 sequence -
10 Exon 41636 - 41791 38627250-38627405 156 sequence download
10 Intron 41792 - 42290 38626751-38627249 499 sequence -
11 Exon 42291 - 42366 38626675-38626750 76 sequence download
11 Intron 42367 - 46163 38622878-38626674 3797 sequence -
12 Exon 46164 - 46255 38622786-38622877 92 sequence download
12 Intron 46256 - 47440 38621601-38622785 1185 sequence -
13 Exon 47441 - 47610 38621431-38621600 170 sequence download
13 Intron 47611 - 48054 38620987-38621430 444 sequence -
14 Exon 48055 - 48249 38620792-38620986 195 sequence download
14 Intron 48250 - 51323 38617718-38620791 3074 sequence -
15 Exon 51324 - 53743 38615298-38617717 2420 sequence download
Close  5' untranslated regions 
 UTR 1   UTR 2   UTR 3   UTR 4 
 Supporting GenBank
accession identifers 		 NM_001195071
BX648345
 NM_012264
AK292652
 AK309071
 NM_001195072
CR749859
AB097053
BC015489
CR456413
 Length  224 209 180 508
 Number of ATGs in frame  0 0 0 3
 Total number of ATGs  1 2 1 9
 Number of GTGs in frame  5 6 5 4
 Total number of GTGs  7 8 7 21
 Number of CTGs in frame  5 0 0 1
 Total number of CTGs  6 0 0 7
 Number of micro ORFs in frame  0 0 0 1
 Total number of micro ORFs  1 1 1 1
 GC percentage  67 75 74 68
 Number of pyrimidine tracks  1 0 0 0
Close 3' untranslated regions 
 UTR 1   UTR 2 
 Supporting GenBank
accession identifers 		 AK309071
 NM_001195072
NM_012264
NM_001195071
AL096879
AK075417
BC015489
CR749859
AB097053
BC012983
BX648345
CR456413
AK292652
 Length  377 2178
 Number of ATGs in frame  2 11
 Total number of ATGs  6 23
 Number of GTGs in frame  2 30
 Total number of GTGs  13 77
 Number of CTGs in frame  1 16
 Total number of CTGs  6 45
 GC percentage  55 60
 Number of pyrimidine tracks  3 25
miRNAs Close
 Identifier    Name    Gene coordinates   Chromosomal coordinates   Prediction algorithm 
Group 1
M1 hsa-miR-25 51573 - 51580 38617461 - 38617468 pictar
M2 hsa-miR-326 51642 - 51649 38617392 - 38617399 pictar
Group 2
M1 hsa-miR-326 51711 - 51718 38617323 - 38617330 pictar
M2 hsa-miR-34c 51779 - 51786 38617255 - 38617262 pictar
M3 hsa-miR-34a 51780 - 51787 38617254 - 38617261 pictar
M4 hsa-miR-326 51795 - 51802 38617239 - 38617246 pictar
M5 hsa-miR-367 51976 - 51984 38617057 - 38617065 targetscan
M6 hsa-miR-92a 51976 - 51984 38617057 - 38617065 targetscan
M7 hsa-miR-92 51976 - 51983 38617058 - 38617065 pictar
M8 hsa-miR-92b 51976 - 51984 38617057 - 38617065 targetscan
M9 hsa-miR-367 51976 - 51983 38617058 - 38617065 pictar
M10 hsa-miR-25 51976 - 51984 38617057 - 38617065 targetscan
M11 hsa-miR-32 51976 - 51983 38617058 - 38617065 pictar
M12 hsa-miR-32 51976 - 51984 38617057 - 38617065 targetscan
M13 hsa-miR-25 51976 - 51983 38617058 - 38617065 pictar
M14 hsa-miR-363 51976 - 51984 38617057 - 38617065 targetscan
M15 hsa-miR-103 52122 - 52130 38616911 - 38616919 targetscan
M16 hsa-miR-107 52122 - 52130 38616911 - 38616919 targetscan
M17 hsa-miR-149 52137 - 52145 38616896 - 38616904 targetscan
M18 hsa-miR-134 52152 - 52159 38616882 - 38616889 pictar
M19 hsa-miR-34c 52257 - 52264 38616777 - 38616784 pictar
M20 hsa-miR-34a 52257 - 52264 38616777 - 38616784 pictar
M21 hsa-miR-34a 52303 - 52310 38616731 - 38616738 pictar
M22 hsa-miR-34c 52312 - 52319 38616722 - 38616729 pictar
M23 hsa-miR-34a 52312 - 52319 38616722 - 38616729 pictar
M24 hsa-miR-124 52647 - 52655 38616386 - 38616394 targetscan
M25 hsa-miR-506 52647 - 52655 38616386 - 38616394 targetscan
M26 hsa-miR-124a 52648 - 52655 38616386 - 38616393 pictar
M27 hsa-miR-134 52654 - 52661 38616380 - 38616387 pictar
M28 hsa-miR-25 52745 - 52752 38616289 - 38616296 pictar
M29 hsa-miR-326 52758 - 52765 38616276 - 38616283 pictar
M30 hsa-miR-326 52850 - 52857 38616184 - 38616191 pictar
M31 hsa-miR-134 52896 - 52903 38616138 - 38616145 pictar
M32 hsa-miR-326 52942 - 52949 38616092 - 38616099 pictar
M33 hsa-miR-134 52968 - 52975 38616066 - 38616073 pictar
M34 hsa-miR-34a 53068 - 53075 38615966 - 38615973 pictar
M35 hsa-miR-326 53130 - 53137 38615904 - 38615911 pictar
M36 hsa-miR-326 53151 - 53158 38615883 - 38615890 pictar
M37 hsa-miR-875-3p 53513 - 53519 38615522 - 38615528 pita
M38 hsa-miR-619 53515 - 53521 38615520 - 38615526 pita
M39 hsa-miR-1276 53528 - 53534 38615507 - 38615513 pita
M40 hsa-miR-520d-5p 53531 - 53537 38615504 - 38615510 pita
M41 hsa-miR-524-5p 53531 - 53537 38615504 - 38615510 pita
M42 hsa-miR-26a 53533 - 53554 38615487 - 38615508 miranda
M43 hsa-miR-26b 53535 - 53554 38615487 - 38615506 miranda
M44 hsa-miR-1297 53539 - 53554 38615487 - 38615502 miranda
M45 hsa-miR-630 53543 - 53549 38615492 - 38615498 pita
M46 hsa-miR-1297 53546 - 53554 38615487 - 38615495 targetscan
M47 hsa-miR-26a 53546 - 53554 38615487 - 38615495 targetscan
M48 hsa-miR-26b 53546 - 53554 38615487 - 38615495 targetscan
M49 hsa-miR-26b 53546 - 53553 38615488 - 38615495 pictar
M50 hsa-miR-26a 53546 - 53553 38615488 - 38615495 pictar
M51 hsa-miR-1297 53547 - 53553 38615488 - 38615494 pita
M52 hsa-miR-26a 53547 - 53553 38615488 - 38615494 pita
M53 hsa-miR-26b 53547 - 53553 38615488 - 38615494 pita
Group 3
M1 hsa-miR-485-3p 53563 - 53569 38615472 - 38615478 pita
M2 hsa-miR-487a 53563 - 53570 38615471 - 38615478 pita
M3 hsa-miR-485-3p 53570 - 53576 38615465 - 38615471 pita
M4 hsa-miR-548o 53593 - 53599 38615442 - 38615448 pita
M5 hsa-miR-1323 53593 - 53599 38615442 - 38615448 pita
M6 hsa-miR-34c 53613 - 53620 38615421 - 38615428 pictar
M7 hsa-miR-34a 53613 - 53620 38615421 - 38615428 pictar
M8 hsa-miR-656 53719 - 53725 38615316 - 38615322 pita
Protein features Close
 Category   Feature identifier   Feature name   Exons   Start on gene   End on gene 
Localization EXONT:000071 Transmembrane_helix 3 25185 25256
Localization EXONT:000071 Transmembrane_helix 5 26980 27054
Localization EXONT:000071 Transmembrane_helix 5,10 27094 41765
Localization EXONT:000071 Transmembrane_helix 12 46170 46232
Localization EXONT:000071 Transmembrane_helix 13 47457 47525
Localization EXONT:000064 Nuclear_localization_signal 13 47532 47552
Localization EXONT:000071 Transmembrane_helix 13,14 47559 48074
Localization EXONT:000071 Transmembrane_helix 14 48129 48197
Structure EXONT:000074 Intrinsically_unstructured_polypeptide_region 3 25074 25175
Structure EXONT:000071 Transmembrane_helix 3 25185 25256
Structure EXONT:000071 Transmembrane_helix 5 26980 27054
Structure EXONT:000071 Transmembrane_helix 5,10 27094 41765
Structure EXONT:000071 Transmembrane_helix 12 46170 46232
Structure EXONT:000071 Transmembrane_helix 13 47457 47525
Structure EXONT:000071 Transmembrane_helix 13,14 47559 48074
Structure EXONT:000071 Transmembrane_helix 14 48129 48197
PTM EXONT:000161 O-phospho-L-serine 3 25140 25142
PTM EXONT:000797 Ubiquitinylated lysine 15 51341 51343
PTM EXONT:000164 O4'-phospho-L-tyrosine 15 51431 51433
PTM EXONT:000161 O-phospho-L-serine 15 51497 51499
PTM EXONT:000161 O-phospho-L-serine 15 51503 51505
PTM EXONT:000162 O-phospho-L-threonine 15 51533 51535
PTM EXONT:000161 O-phospho-L-serine 15 51545 51550
Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B
Gene TMEM184B Gene TMEM184B

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Exon 1Exon 2Exon 3Exon 4Exon 5Exon 6Exon 7Exon 8Exon 9Exon 10Exon 11Exon 12Exon 13Exon 14Exon 1Exon 2Exon 3Exon 4Exon 5Exon 6Exon 7Exon 8Exon 9Exon 10Exon 11Exon 12Exon 13Exon 14Exon 15Extended region