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Previous gene FasterDB identifier: 13933 - SEPT14 (FLJ44060) septin 14 Next gene
Gene Close
Symbol SEPT14
Synonyms FLJ44060
Description septin 14
EnsEMBL link ENSG00000154997
Chromosome 7 - reverse strand
Chromosomal location
(UCSC link)		 55861237 - 55930482 (69246bp)
Sequence sequence
Associated transcripts NM_207366 AK301928 AK126048
Alternative 3' splice site (acceptor) Close
 Identifier   Position   Distance (bp)   Transcript 
Alternative 5' splice sites (donor) Close
 Identifier   Position   Distance (bp)   Transcript 
Intron retentions Close
 Identifier   Position   Transcript 
Exon deletions Close
 Identifier   Position   Transcript 
No data
Transcription start sites Close
 Identifier   Position   Gene coordinates   Chromosomal coordinates   Transcript 
P1 1 1 55930482 NM_207366
P2 1 38 55930445 AK301928
P3 6 28241 55902242 AK126048
Protein prediction Close
 Transcript name   Sequence 
NM_207366 sequence
AK301928 sequence
AK126048 sequence
Polyadenylation Close
 Identifier   Position   Gene coordinates of cleavage site   Chromosomal coordinates of cleavage site   Pattern   PolyA tail   Accession number   Type 
PA1 10 67305 55863178 no AK301928 Full_length
PA2 10 69246 55861237 AATAAA no NM_207366 Cdna
PA3 10 69246 55861237 AATAAA no AK126048 Full_length

More polyadenylation sites ...

Exon skipping Close
 Identifier   Position   Transcript 
No data
Splice site strength Close
 Identifier   Site   Exon   Strength   Alternative   Sequence 
S1 5' (donor) 1 9.72 no AAAgtaagt
S2 5' (donor) 2 -12.18 no ACAgttaag
S3 3' (acceptor) 2 8.52 no ttatttttttaaatttccagCTC
S4 5' (donor) 3 10.24 no TGGgtaagt
S5 3' (acceptor) 3 5.02 no aaatttttgttttatttaagCAA
S6 5' (donor) 4 10.67 no CAGgtgagt
S7 3' (acceptor) 4 9.05 no tgactctatgtctattacagGGG
S8 5' (donor) 5 9.79 no AAGgtatgt
S9 3' (acceptor) 5 6.69 no atgtataaatttttttttagCTA
S10 5' (donor) 6 8.46 no AGTgtaagt
S11 3' (acceptor) 6 12.32 no tttgtcttctttcttcatagGTG
S12 5' (donor) 7 8.38 no AAGgtaaaa
S13 3' (acceptor) 7 10.62 no atgtcattcttgttttctagGGG
S14 5' (donor) 8 8.83 no TAGgtgagt
S15 3' (acceptor) 8 5.43 no cattattatttttttactagTGG
S16 5' (donor) 9 7.15 no GAGgttagt
S17 3' (acceptor) 9 3.36 no aagaaaacatttctctttagTTT
S18 3' (acceptor) 10 6.71 no actgcacattggtttcacagCTG
Conserved exons Close
 Gene identifier mouse   Position human  Position mouse 
20640 3 4
20640 4 5
20640 5 6
20640 6 8
20640 7 9
20640 8 10
20640 9 11
20640 10 12
Report Close
 Exon   Number of supporting transcripts 
 Transcription initiation & first exon(s) 
1 2
6 1
 Transcription termination & last exon(s) 
10 3
Splicing factors Close
 Splicing factor   Exon array   CLIP data   Exon position 
CELF1 (CUG-BP)
 
DAZAP1
 
ELAVL1 (HuR) Yes Yes
 
ESRP1/2 (ESRP) Yes
 
FUS Yes
 
HNRNPA1 Yes
 
HNRNPA2B1 Yes
 
HNRNPAB
 
HNRNPC Yes
 
HNRNPF/HNRNPH1 Yes Yes
 
HNRNPL Yes
 
HNRNPL_2
 
HNRNPM Yes
 
HNRNPU Yes
 
MBNL
 
NOVA1
 
PTBP1/2 (PTB) Yes Yes
 
QKI
 
RBFOX2 (FOX2) Yes
 
RBM4 Yes
 
SFRS3 (SRP20)
 
SFRS6 (SRP55)
 
SFRS7 (9G8)
 
SRSF1 (SF2ASF)
 
SRSF2 (SC35)
 
SRSF5 (SRP40)
 
TDP43
 
TIA1/TIAL1 Yes
 
TRA2A
 
TRA2B
 
YBX1 (YB1)
 
Expression Close
 Exon position   Tissues   Cell lines   Cancer cell lines 
1 Expression Expression Expression
2 Expression Expression Expression
3 Expression Expression Expression
4 Expression Expression Expression
5 Expression Expression Expression
6 Expression Expression Expression
7 Expression Expression Expression
8 Expression Expression Expression
9 Expression Expression Expression
10 Expression Expression Expression
Exon-Intron Close
 Position   Type   Gene coordinates   Chromosomal coordinates   Length   Sequence   Features 
1 Exon 1 - 102 55930381-55930482 102 sequence download
1 Intron 103 - 778 55929705-55930380 676 sequence -
2 Exon 779 - 847 55929636-55929704 69 sequence download
2 Intron 848 - 16152 55914331-55929635 15305 sequence -
3 Exon 16153 - 16273 55914210-55914330 121 sequence download
3 Intron 16274 - 18071 55912412-55914209 1798 sequence -
4 Exon 18072 - 18267 55912216-55912411 196 sequence download
4 Intron 18268 - 19661 55910822-55912215 1394 sequence -
5 Exon 19662 - 19848 55910635-55910821 187 sequence download
5 Intron 19849 - 28203 55902280-55910634 8355 sequence -
6 Exon 28204 - 28365 55902118-55902279 162 sequence download
6 Intron 28366 - 43566 55886917-55902117 15201 sequence -
7 Exon 43567 - 43663 55886820-55886916 97 sequence download
7 Intron 43664 - 55531 55874952-55886819 11868 sequence -
8 Exon 55532 - 55700 55874783-55874951 169 sequence download
8 Intron 55701 - 57399 55873084-55874782 1699 sequence -
9 Exon 57400 - 57532 55872951-55873083 133 sequence download
9 Intron 57533 - 66697 55863786-55872950 9165 sequence -
10 Exon 66698 - 69246 55861237-55863785 2549 sequence download
Close  5' untranslated regions 
 UTR 1   UTR 2 
 Supporting GenBank
accession identifers 		 NM_207366
 AK301928
 Length  117 80
 Number of ATGs in frame  0 0
 Total number of ATGs  0 0
 Number of GTGs in frame  3 3
 Total number of GTGs  6 5
 Number of CTGs in frame  1 0
 Total number of CTGs  3 2
 Number of micro ORFs in frame  0 0
 Total number of micro ORFs  0 0
 GC percentage  47 50
 Number of pyrimidine tracks  0 0
Close 3' untranslated regions 
 UTR 1 
 Supporting GenBank
accession identifers 		 NM_207366
AK126048
AK301928
 Length  2369
 Number of ATGs in frame  14
 Total number of ATGs  37
 Number of GTGs in frame  15
 Total number of GTGs  41
 Number of CTGs in frame  11
 Total number of CTGs  29
 GC percentage  36
 Number of pyrimidine tracks  20
miRNAs Close
 Identifier    Name    Gene coordinates   Chromosomal coordinates   Prediction algorithm 
Group 1
M1 hsa-miR-146a 66943 - 66967 55863516 - 55863540 miranda
M2 hsa-miR-146b-5p 66943 - 66967 55863516 - 55863540 miranda
Group 2
M1 hsa-miR-182 67407 - 67435 55863048 - 55863076 miranda
M2 hsa-miR-105 67768 - 67774 55862709 - 55862715 pita
M3 hsa-miR-607 67770 - 67776 55862707 - 55862713 pita
M4 hsa-miR-374b 68689 - 68711 55861772 - 55861794 miranda
M5 hsa-miR-374a 68689 - 68711 55861772 - 55861794 miranda
M6 hsa-miR-340 68775 - 68796 55861687 - 55861708 miranda
M7 hsa-miR-422a 68802 - 68824 55861659 - 55861681 miranda
M8 hsa-miR-222 68835 - 68859 55861624 - 55861648 miranda
M9 hsa-miR-221 68836 - 68859 55861624 - 55861647 miranda
M10 hsa-miR-221 68851 - 68859 55861624 - 55861632 targetscan
M11 hsa-miR-222 68851 - 68859 55861624 - 55861632 targetscan
M12 hsa-miR-377 68930 - 68952 55861531 - 55861553 miranda
M13 hsa-miR-376c 68977 - 68997 55861486 - 55861506 miranda
M14 hsa-miR-26a 68999 - 69021 55861462 - 55861484 miranda
M15 hsa-miR-26b 69000 - 69021 55861462 - 55861483 miranda
Protein features Close
 Category   Feature identifier   Feature name   Exons   Start on gene   End on gene 
Binding EXONT:000062 Nucleotide_binding_site 3,4 16273 18094
Binding EXONT:000062 Nucleotide_binding_site 6 28228 28254
Localization EXONT:000067 Nuclear_export_signal 9,10 57530 66739
Localization EXONT:000064 Nuclear_localization_signal 10 66851 66862
Structure EXONT:000074 Intrinsically_unstructured_polypeptide_region 2,3 794 16155
Structure EXONT:000035 Coiled_coil 9,10 57407 66814
PTM EXONT:000161 O-phospho-L-serine 6 28294 28296
PTM EXONT:000162 O-phospho-L-threonine 9 57509 57511
Unclassified EXONT:002271 P-loop containing nucleoside triphosphate hydrolase 3,4,5,6,7,8 16198 55578
Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14
Gene SEPT14 Gene SEPT14

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Exon 1Exon 2Exon 3Exon 4Exon 5Exon 6Exon 7Exon 8Exon 9Exon 1Exon 2Exon 3Exon 4Exon 5Exon 6Exon 7Exon 8Exon 9Exon 10Extended region