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Previous gene FasterDB identifier: 8317 - 4930506F14Rik (ENSMUSG00000066371) RIKEN cDNA 4930506F14 gene Gene Next gene
Gene Close
Symbol 4930506F14Rik
Synonyms ENSMUSG00000066371
Description RIKEN cDNA 4930506F14 gene Gene
EnsEMBL link ENSMUSG00000066371
Chromosome 9 - forward strand
Chromosomal location
(UCSC link)		 107774790 - 107775570 (781bp)
Sequence sequence
Associated transcripts AK015717
Alternative 3' splice site (acceptor) Close
 Identifier   Position   Distance (bp)   Transcript 
Alternative 5' splice sites (donor) Close
 Identifier   Position   Distance (bp)   Transcript 
Intron retentions Close
 Identifier   Position   Transcript 
Exon deletions Close
 Identifier   Position   Transcript 
No data
Transcription start sites Close
 Identifier   Position   Gene coordinates   Chromosomal coordinates   Transcript 
P1 1 1 107774790 AK015717
Protein prediction Close
 Transcript name   Sequence 
AK015717 sequence
Polyadenylation Close
 Identifier   Position   Gene coordinates of cleavage site   Chromosomal coordinates of cleavage site   Pattern   PolyA tail   Accession number   Type 
PA1 1 781 107775570 AATAAA no AK015717 Full_length

More polyadenylation sites ...

Exon skipping Close
 Identifier   Position   Transcript 
No data
Splice site strength Close
 Identifier   Site   Exon   Strength   Alternative   Sequence 
No data
Conserved exons Close
 Gene identifier human   Position mouse  Position human 
No data
Report Close
 Exon   Number of supporting transcripts 
 Transcription initiation & first exon(s) 
1 1
 Transcription termination & last exon(s) 
1 1
Splicing factors Close
 Splicing factor   Exon array   CLIP data   Exon position 
CELF1 (CUG-BP)
 
DAZAP1
 
ELAVL1 (HuR)
 
ESRP1/2 Yes
 
FUS Yes
 
HNRNPA1
 
HNRNPA2B1
 
HNRNPAB
 
HNRNPC
 
HNRNPF-H
 
HNRNPL Yes
 
HNRNPL_2
 
HNRNPM
 
HNRNPU
 
MBNL3KO/MBNL3WT/MBNL3C2C12 Yes
 
Nova/Nova1 Yes
 
PTBP1/2 Yes
 
QKI
 
RBFOX2
 
RBM4 Yes
 
SFRS3 (SRP20)
 
SFRS6 (SRP55)
 
SFRS7 (9G8)
 
SRSF1 Yes
 
SRSF2 Yes
 
SRSF5 (SRP40)
 
TIA1/TIAL1
 
TRA2A
 
TRA2B
 
YBX1
 
Expression Close
 Exon position   Tissues   Cell lines 
1 Expression Expression
Exon-Intron Close
 Position   Type   Gene coordinates   Chromosomal coordinates   Length   Sequence   Features 
1 Exon 1 - 781 107774790 - 107775570 781 sequence download
Close  5' untranslated regions 
 UTR 1 
 Supporting GenBank
accession identifers 		 AK015717
 Length  338
 Number of ATGs in frame  0
 Total number of ATGs  0
 Number of GTGs in frame  1
 Total number of GTGs  6
 Number of CTGs in frame  0
 Total number of CTGs  2
 Number of micro ORFs in frame  0
 Total number of micro ORFs  0
 GC percentage  73
 Number of pyrimidine tracks  2
Close 3' untranslated regions 
 UTR 1 
 Supporting GenBank
accession identifers 		 AK015717
 Length  52
 Number of ATGs in frame  0
 Total number of ATGs  1
 Number of GTGs in frame  0
 Total number of GTGs  1
 Number of CTGs in frame  0
 Total number of CTGs  0
 GC percentage  44
 Number of pyrimidine tracks  1
miRNAs Close
 Identifier    Name    Gene coordinates   Chromosomal coordinates   Prediction algorithm 
No data
Protein features Close
 Category   Feature identifier   Feature name   Exons   Start on gene   End on gene 
Localization EXONT:000071 Transmembrane_helix 1,2,3 457 4086
Localization EXONT:000071 Transmembrane_helix 4 5180 5251
Localization EXONT:000071 Transmembrane_helix 5,6 6984 14727
Localization EXONT:000071 Transmembrane_helix 6 14734 14802
Structure EXONT:000071 Transmembrane_helix 1,2,3 457 4086
Structure EXONT:000071 Transmembrane_helix 4 5180 5251
Structure EXONT:000071 Transmembrane_helix 5,6 6984 14727
Structure EXONT:000071 Transmembrane_helix 6 14734 14802
Gene 4930506F14Rik

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Exon 1Extended region