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Previous gene FasterDB identifier: 13090 - POM121L12 (DKFZp564N2472) POM121 membrane glycoprotein-like 12 Next gene
Gene Close
Symbol POM121L12
Synonyms DKFZp564N2472
Description POM121 membrane glycoprotein-like 12
EnsEMBL link ENSG00000221900
Chromosome 7 - forward strand
Chromosomal location
(UCSC link)		 53103349 - 53104617 (1269bp)
Sequence sequence
Associated transcripts NM_182595 AL833888
Alternative 3' splice site (acceptor) Close
 Identifier   Position   Distance (bp)   Transcript 
Alternative 5' splice sites (donor) Close
 Identifier   Position   Distance (bp)   Transcript 
Intron retentions Close
 Identifier   Position   Transcript 
Exon deletions Close
 Identifier   Position   Transcript 
No data
Transcription start sites Close
 Identifier   Position   Gene coordinates   Chromosomal coordinates   Transcript 
P1 1 1 53103349 NM_182595
Protein prediction Close
 Transcript name   Sequence 
NM_182595 sequence
AL833888 sequence
Polyadenylation Close
 Identifier   Position   Gene coordinates of cleavage site   Chromosomal coordinates of cleavage site   Pattern   PolyA tail   Accession number   Type 
PA1 1 1269 53104617 ATTAAA yes NM_182595 Cdna

More polyadenylation sites ...

Exon skipping Close
 Identifier   Position   Transcript 
No data
Splice site strength Close
 Identifier   Site   Exon   Strength   Alternative   Sequence 
No data
Conserved exons Close
 Gene identifier mouse   Position human  Position mouse 
No data
Report Close
 Exon   Number of supporting transcripts 
 Transcription initiation & first exon(s) 
1 1
 Transcription termination & last exon(s) 
1 1
Splicing factors Close
 Splicing factor   Exon array   CLIP data   Exon position 
CELF1 (CUG-BP)
 
DAZAP1
 
ELAVL1 (HuR) Yes Yes
 
ESRP1/2 (ESRP) Yes
 
FUS Yes
 
HNRNPA1 Yes
 
HNRNPA2B1 Yes
 
HNRNPAB
 
HNRNPC Yes
 
HNRNPF/HNRNPH1 Yes Yes
 
HNRNPL Yes
 
HNRNPL_2
 
HNRNPM Yes
 
HNRNPU Yes
 
MBNL
 
NOVA1
 
PTBP1/2 (PTB) Yes Yes
 
QKI
 
RBFOX2 (FOX2) Yes
 
RBM4 Yes
 
SFRS3 (SRP20)
 
SFRS6 (SRP55)
 
SFRS7 (9G8)
 
SRSF1 (SF2ASF)
 
SRSF2 (SC35)
 
SRSF5 (SRP40)
 
TDP43
 
TIA1/TIAL1 Yes
 
TRA2A
 
TRA2B
 
YBX1 (YB1)
 
Expression Close
 Exon position   Tissues   Cell lines   Cancer cell lines 
1 Expression Expression Expression
Exon-Intron Close
 Position   Type   Gene coordinates   Chromosomal coordinates   Length   Sequence   Features 
1 Exon 1 - 1269 53103349 - 53104617 1269 sequence download
 5' untranslated regions  Close
No data
Close 3' untranslated regions 
 UTR 1 
 Supporting GenBank
accession identifers 		 NM_182595
AL833888
 Length  362
 Number of ATGs in frame  0
 Total number of ATGs  2
 Number of GTGs in frame  4
 Total number of GTGs  13
 Number of CTGs in frame  2
 Total number of CTGs  2
 GC percentage  52
 Number of pyrimidine tracks  6
miRNAs Close
 Identifier    Name    Gene coordinates   Chromosomal coordinates   Prediction algorithm 
Group 1
M1 hsa-let-7b 962 - 986 53104310 - 53104334 miranda
M2 hsa-let-7e 962 - 986 53104310 - 53104334 miranda
M3 hsa-miR-590-3p 1222 - 1244 53104570 - 53104592 miranda
Protein features Close
 Category   Feature identifier   Feature name   Exons   Start on gene   End on gene 
Structure EXONT:000074 Intrinsically_unstructured_polypeptide_region 1 17 187
Structure EXONT:000074 Intrinsically_unstructured_polypeptide_region 1 245 316
Structure EXONT:000074 Intrinsically_unstructured_polypeptide_region 1 434 526
Structure EXONT:000074 Intrinsically_unstructured_polypeptide_region 1 623 667
PTM EXONT:000161 O-phospho-L-serine 1 116 118
PTM EXONT:000161 O-phospho-L-serine 1 122 124
PTM EXONT:000162 O-phospho-L-threonine 1 143 145
PTM EXONT:000161 O-phospho-L-serine 1 149 151
Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12
Gene POM121L12 Gene POM121L12

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Exon 1Extended region